Disease: Childhood Acute Lymphoblastic Leukemia
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs3135388
HLA-DRA
0.807 0.240 6 32445274 downstream gene variant A/G snv 0.90 7
rs10235796
IKZF1
0.882 0.120 7 50394939 intron variant T/C snv 0.82 3
rs11099592
HPSE
0.851 0.160 4 83309466 missense variant T/C snv 0.78 0.80 5
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs10821936
ARID5B
0.742 0.200 10 61963818 intron variant C/T snv 0.69 11
rs861530
LOC112268131 ; XRCC3 ; KLC1
0.732 0.320 14 103707786 3 prime UTR variant T/C snv 0.65 13
rs7088318
PIP4K2A
0.851 0.120 10 22564019 intron variant C/A snv 0.55 4
rs3737966
C1orf167 ; MTHFR
0.882 0.120 1 11787702 3 prime UTR variant C/T snv 0.55 3
rs9479
PML
0.851 0.120 15 74036235 3 prime UTR variant A/G snv 0.50 6
rs10740055
ARID5B
0.790 0.240 10 61958720 intron variant C/A snv 0.49 7
rs10994982
ARID5B
0.790 0.120 10 61950345 intron variant A/G snv 0.49 7
rs1573613
ETV6
0.882 0.120 12 11894684 3 prime UTR variant T/C snv 0.48 3
rs1544105
FPGS
0.851 0.200 9 127800446 intron variant C/T snv 0.48 4
rs4880
SOD2
0.500 0.840 6 159692840 missense variant A/G snv 0.48 0.47 131
rs1801394
FASTKD3 ; MTRR
0.531 0.840 5 7870860 missense variant A/G snv 0.47 0.45 101
rs10106
FPGS
0.851 0.200 9 127813796 3 prime UTR variant T/C snv 0.45 4
rs1051296
SLC19A1
0.882 0.120 21 45514947 3 prime UTR variant A/C snv 0.43 0.44 3
rs442264
LMO1
0.882 0.120 11 8242602 intron variant G/A snv 0.44 3
rs153109
IL27
0.623 0.600 16 28507775 intron variant T/C snv 0.43 37
rs2413739
PACSIN2
0.827 0.120 22 43001030 intron variant C/T snv 0.43 6
rs7789635 0.882 0.120 7 50405912 downstream gene variant T/C snv 0.40 4
rs4646450
CYP3A5 ; ZSCAN25
0.882 0.120 7 99668695 3 prime UTR variant G/A snv 0.38 4
rs2236225
MTHFD1
0.614 0.640 14 64442127 missense variant G/A snv 0.44 0.38 52
rs2239633
CEBPE
0.742 0.240 14 23119848 upstream gene variant G/A snv 0.38 12